rs31661104 SNP Detail

Summary

• ID
  rs31661104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27156330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTGACCA TTATAAAATG
  TAATCTGTGA GTCATTTCCA AGTACTGTAG GTCAGCTTTG TTGTAAACTG GGGTATGTGT
  GTGTTTGTGT GTTTACACGT GCATGCACGA GTGTACTTAT GCGGGTACAG TACAGGGCCC
  CCTGATGTGT ATCAGGCAGG TGCTTTCTAC TTTTTTCTTG CTAAAGATGG GATCTCTCCT
  R
  GCATGGACTT CACCAAGTCG GCTACACTAG CTGACACCAA ACTCCAGGAG TGCTCCCGAC
  TCTGCCGCAG CTCCGTAGGT TCTAAAGAGA GAACTCACTC AGGTCCTCAC AACAGCTCTA
  GACCATTCTG TTATTGGTGT TGAAGGCAAC GTTCCTTTAA TTTAATGTGA AAAGCACATT
  TAGAGATATC CTCAGAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45556985	mCV24739733	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss134702041	ENSMUSSNP1461981	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31661104					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27156330 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574344	regulatory region 574344	793 bp proximal