rs31651046 SNP Detail

Summary

• ID
  rs31651046
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52813487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGATGGCA AACCTTTGTC
  CTTTTAAAAG ATCCAAAAAT TACTTGAAGC CCAGTCAGGT GAATAAAATC CGAGGTTTAC
  AGTACCTACC TTGGGTACAG ATATCAAGGA TGTTTGTGTT TGTTTGGCTT GTTTTATACT
  TTTGAATGAG ACAGACCTAT AGACTAACAA AGCCTTTCTT CCTAGTGTGA CAGAGATTGC
  Y
  ATCCCTATAG CCTTTCCAGG GCCTGTGTAG GGCTCTTGTG AATTATCCAT CATGGCCCTT
  GCCAACCCTT GTGGAAGCAA CATGCCTAAC AACTGTCTCC TTTAGTGTCT GGAACTCCAC
  AGGGCAGGGA CCTTCCATGC ATTCTCGCTC TTCCTAACCT GACACTGCGC TTTAACTTAG
  GAATAATAGC TTAGTCAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45556446	mCV25212730	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31651046					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52813487 () rs orientation: forward

Symbol	Name	Function Class
Gm20750	predicted gene, 20750	690 bp downstream
Rr576600	regulatory region 576600	1199 bp proximal
Rr576601	regulatory region 576601	1288 bp proximal