rs31644335 SNP Detail

Summary

• ID
  rs31644335
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146048491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGTAAAA ATGAAGAATG
  TGAAGGAAAT GCTGGATAGG GGAAGAGGGA AGAAGATCTA CAAGTCATTG GACCTTAAAA
  TTCCACTTGG AAACAAAGAA CAATGTAACT TCATCATGAA GCCATTTGCA CCCTCTTTGC
  AATGAAACAC TGCTTTCTCA TTTGATTCTT AAGGCAAAGA GCTATCTTGA GTTAAAAAAA
  M
  AAAAAAAACA CAAGACATAC ACTGTGTGTG TTTGACTGTG TCTATCTGGG AAATCCTAGT
  ACTAAAAGAG CCAAGCCTGG GTGATAAAAC AGCAAAGTGG CAACTAGATT GGTGGAAAAA
  GCTCAGGTGA GCACATGGCC CACAGAGGTG CAAGCCAGAG AGAGGTGATA CAATGTGTCC
  AGAGACAATG GCACACAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45555174	mCV24237051	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31644335					SNP	A	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146048491 () rs orientation: forward

Symbol	Name	Function Class
Rr587007	regulatory region 587007	244 bp distal
Rr587008	regulatory region 587008	968 bp proximal
Rr587009	regulatory region 587009	1077 bp proximal