rs31643324 SNP Detail

Summary

• ID
  rs31643324
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129966753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGAGGCCC CAGAGCAGGA ACCCAAACGA GCAAATGTTT
  TAAGTGCTTT GGTTAGCGCT GAGGTCTTCC CTGGGAATGC TTTTCTGTAG CTCTTGGCTC
  W
  GCCTTCTGAC CTTCCCTTTC CCCTGTGTGC CAAGCTTTCT TTCTTCCCAT GAAAGATAGC
  TTGTGTTTGC AGCGCCACAG GTTTTTATTC CAGATGCTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45554664	mCV23983896	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss135892769	ENSMUSSNP1977741	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31643324					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129966753 () rs orientation: forward

Symbol	Name	Function Class
4930502M04Rik	RIKEN cDNA 4930502M04 gene	within coordinates
Cpgi13822	CpG island 13822	102 bp distal
Rr585141	regulatory region 585141	within coordinates