rs3162664 SNP Detail

Summary

• ID
  rs3162664
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:47622206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGATCTGT AAAGTACTGA
  TAAGATACTA GTCCTTTCTT TATGTTTTCC AAAAAATGAT TATCATATGG CTCCAAGAAC
  TTATCATGAT ATATTTTCAT GTCAACATTA AACGTGCATA GAGTTTTAAT TATGAAAAGG
  GGAGAAAATT GAATATGTGT AAATCTTAAA AGCCATGTAC TTCAGGGAGA GAGAAAATAT
  G
  TTGTACGAAA TATCTGTAAT CCTATACATG ATTTTTTTGA CCACAATTTT GAGTCTTACA
  AGTCACACAT AGTGAAATCT TATCTTTAAA AGTAAGTACA TGAAAAGAGA GTGGAAAATT
  ACTTATGTGT TTAATTCACA AAAGTATTAT ATATGATGAA ATTGTAAAGT AGACTATGGG
  ATTTTAAATA TTGATGCTTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135092337	ENSMUSSNP1203575	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs3162664					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:47622206 () rs orientation: forward

Symbol	Name	Function Class
Rr576075	regulatory region 576075	1029 bp proximal