rs31625067 SNP Detail

Summary

• ID
  rs31625067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104469510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACTGGGC CACCAATGGG
  GGGGGGGGGT CAGGCAGAAG CTGGCAGGGC CTAGGCCCCC TACACATTTG TAGCAGATGT
  GCAGTTTGGT CTTCATGTGG GTCCCCTAAC AATTGGAGCA TGGGCTGTTT CTGACTCTGT
  TGCTGGACAT TGGATCTTCT TGCTTCTACC CGGACTTCCT GGTTGGGCTT CAGTGGGAGA
  Y
  GATGTGCTTA GTTCTGCTGG GACTAGATAG ATGTCCCAGG ATGGGGTGGT GCCCGAGGGG
  GGATCCCCCT TCTCTGAGGA GAGTCTCTGT AAGTGTGGAA CTGAGAGGAG AGGAGGGAGG
  GGGCTTTGAT TGGCATGTAA AGTGAATAAA AATAAATAAT TTCTTTTAAA AAGCAAGGGG
  GGGGGGGGGA AGAATTATAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45553268	mCV23110224	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss135569366	ENSMUSSNP2060497	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs31625067					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104469510 () rs orientation: forward

Symbol	Name	Function Class
Rr582541	regulatory region 582541	299 bp distal