rs31621379 SNP Detail

Summary

• ID
  rs31621379
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:50400283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAGCTTT TGTTTCCTCA
  AAAGGGAACA ATAATTCCAA AGAGATAAAA GTTTAAAGTG AAGCATGAAG ACCCCAGGCA
  CCAGTGCTCT GTCCTGGCCA TGGCACCAGG CTTTGACCAC TAAATTATAA ATGGTTGGAC
  TAGTAAGACT GGGGGCTATT AAGACAGGAT GTTGGAAACA GTTTAAAGGA GAGAAAAAAT
  R
  TTCTTCCAAT TCTAAATAAC ATTCTCCTCC TCAGTAATTT TTATAGGAAT TTATGGAGAA
  AAATATTCTA AAATTATACT AATAGCCAAG AAGGTGGTAC TATCCTGTAT GAGACTGAGA
  TTCCAACTTT CTTCAAAACT GCACACAGTT AATAAAAAAC CTTTGTATAT CTCTCTGAAA
  CACCTACAAT TTTACAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45552968	mCV22771511	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31621379					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50400283 () rs orientation: forward

Symbol	Name	Function Class
Rr576159	regulatory region 576159	1730 bp distal
Slc7a11	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	Intron