rs31620276 SNP Detail

Summary

• ID
  rs31620276
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50069830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGGGAG AAGAAGTACC
  TAGCCTTGCA GAGACTTGAA GTGGCAGAGT AGGAGGGATA CTAAGGAGAC CCCACCTACT
  CAGAGGAGAA GGGGGGAAAT GGGGGAAGTA TTGTGGGAGG GGTGACTAGG AGGGGGTAGT
  GATCAGGATG TAAAATAAAC AAGTAAAAAT AAATTAAAAA TTTAAAAATA AAGAATGTTA
  W
  TTGCATGGTG CAGTTTTAAA AATGTCTGAC AAACAGCTAT TGAAGAACCT AAAATGAATA
  TTTTAATTGG ACTGACAGTG TGAACTTCTT CCATGAGACC TCTTTAACAA ACCATAATCT
  ATTCTTCATT TGAGAAATAA AAGTGTCCCC TATCGTGGTA GTAGCAAACC TCTTTATCTT
  TTTATTTTCA CTGTCATAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45552367	mCV24448056	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss135151815	ENSMUSSNP453009	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31620276					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50069830 () rs orientation: forward

Symbol	Name	Function Class
Rr576137	regulatory region 576137	1017 bp proximal