rs31620256 SNP Detail

Summary

• ID
  rs31620256
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156446992 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTAGTGAAGG AAGCAGTGTT AAGTGACAAG GATGAGTGAG AAATGGATAG ATTTCAGGTG
  TTTTAAAATT TCTCATAAAC TAGGCAGTGG TGGTGTACAA CTTTAATCCC CGCACTTGGG
  GAAGAAGAGG CAGGTGGATC TATGAGTTCA AAGCCAGCCT GTTCTACAGA GCAAGTTGTA
  GGATAGCCAG GGATACATAG AGAAACCCTG TCCCAAAAAG CCAAAAAAAT GTTTTACATT
  AATTTATGTC TGTGTATGTG TATGCTCACA TGTGTGGTTG GAGGACTGTG TGTGTGTGTG
  Y
  GTGCGCGCGC ATGCCCTCAT GTATACGTTC ACGTGTGAGG TTAGAGGACA GTTTGCAAGA
  GTAGGCTCTC TTCTACCACG TGGGATCCGA GGGTGGAACC AGAGTTATCA AGCTGGGCAG
  CAGGCACCTT TACCACTCTC CAGAGCCATC TCTCTGGACT GATAGGTATT GTCTGAGAAT
  AAGAATGGAG TCATAAATGG TCACAAAGGT TGTGGCTGTA GTGCCTGAAA ATATAAAGTT
  ACCATTGAGT GAGATGGAGG ATTCTAGCAT GAGGAGGAGC AGATTAGAAG TAAGATATGG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45051865	mCV23341345	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31620256					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156446992 () rs orientation: forward

Symbol	Name	Function Class
Abl2	ABL proto-oncogene 2, non-receptor tyrosine kinase	Intron
Rr421205	regulatory region 421205	1873 bp distal
Rr421206	regulatory region 421206	1632 bp proximal