rs31619137 SNP Detail

Summary

• ID
  rs31619137
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:133290742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGGGTT AAACTTTGGG
  ACACTTTCTT TTATTTTATT TTTACATTTA ATTTTTCTTT TCTTTTCCCT CTGTAGACTC
  TTGCCTGTTT CTTGAGATAA CTGACTGTCT TAGAAGCAGC TGAAGAGATG GCTCAGCAGG
  CCAGAGCCCT TGTTGCTTTT GATGGGGATG AGAGATCAGG CCTCAACACT CTCAGGGCTG
  Y
  GCACAGCCTC CTGTGACTCC AGCCTGAGGA GAAGGCATGT CCCAATCATC TGTGACAGCC
  CCAGGAGAAT GAGTGTCCCC TTCTGGCCTC TGCAGTCACT TCCCTCATGG TATATATGCA
  GAGAAAACAC TCATGTGTTT CAAATAAAGA TAAATCTTTT TGAGACAGTG TTCAAGACTT
  ATAATTGGCT TGTTGTTTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45552356	mCV23278129	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135918751	ENSMUSSNP170573	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31619137					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:133290742 () rs orientation: forward

Symbol	Name	Function Class
Gm42567	predicted gene 42567	within coordinates
Rr398036	regulatory region 398036	1766 bp downstream
Rr585576	regulatory region 585576	1395 bp distal
Rr585577	regulatory region 585577	70 bp proximal
Rr585578	regulatory region 585578	1136 bp proximal