rs31618860 SNP Detail

Summary

• ID
  rs31618860
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52405416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTA ACTGGGTCCT TGTAACTGCG
  Y
  CATTTCTCAG GCCTAAGCTA AAATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45552541	mCV24863094	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss135176556	ENSMUSSNP4047168	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss320764296	CHEV_3_52301917	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31618860					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52405416 () rs orientation: forward

Symbol	Name	Function Class
Rr576530	regulatory region 576530	765 bp distal
Rr576531	regulatory region 576531	942 bp proximal