rs31616702 SNP Detail

Summary

• ID
  rs31616702
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:7492124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCAG TGTTTCTACT GACTGTGTAA
  R
  ATATTAGTGA GTCAGTTAAC CCCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45552145	mCV24806631	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss134556572	ENSMUSSNP4074036	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
ss320642392	CHEV_3_7427064	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31616702					SNP	A	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7492124 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Pkia	protein kinase inhibitor, alpha	Intron
Rr573242	regulatory region 573242	1777 bp proximal
Tssr28298	transcription start site region 28298	1984 bp upstream