rs31613794 SNP Detail

Summary

• ID
  rs31613794
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:94895662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAT GGCCCAGTCC ATGAGTGCTA
  Y
  TCCACGATTA CTGAAGGAGC TGTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45552000	mCV24557712	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss135509576	ENSMUSSNP7184406	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss320841072	CHEV_3_94792273	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31613794					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94895662 () rs orientation: forward

Symbol	Name	Function Class
Pi4kb	phosphatidylinositol 4-kinase beta	Intron
Rr580773	regulatory region 580773	335 bp distal
Rr580774	regulatory region 580774	854 bp proximal