rs31605310 SNP Detail

Summary

• ID
  rs31605310
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86989127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACGAGTTAC AGATTCTCTT
  TGGTCAGAAG GTGGTAGATG AGATGTGGCA CGGAATGTGT GTGTGCTCAT GTGTGCATGC
  TGTGTGGGAA AAGATAGCAT GGCCCATGGA ATTCAGTGCC GTTTGTGTTG TTCTACACTA
  AGATCTCCAT CTAGGTCAGT AAGACGTTTC CTTCGCCACC ATTTCCAGGC CCCCATCCCC
  W
  CATGTCCTCT CACTTGTCTC TCCTTGGATG CTAACATGGG ACAAGCTCAA GCTCACAAGG
  TCCCTGCTCC CCACACAGGG ACATCATCAC AAACCTGACA CTCAAGGCAC TGAAAATGGA
  AGAAGGAATC TGATTGGTCA GGGGTGGGGT GGGGGGCAGT GAGGAGGAGA CAAAACCAAA
  ATTTGTCTGG ATAAAGTATC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45551655	mCV24905799	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss135453680	ENSMUSSNP1504571	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs31605310					SNP	A	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86989127 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	mRNA-UTR
Rr579434	regulatory region 579434	498 bp proximal
Rr579435	regulatory region 579435	583 bp proximal