rs31604850 SNP Detail

Summary

• ID
  rs31604850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156572499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGG AACAGGAATT TATAGTGGCT
  R
  ATATATTAAC TCTTACAGCT TTTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45050362	mCV24597246	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145803931	ENSMUSSNP2956293	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320072656	CHEV_1_158675060	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31604850					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156572499 () rs orientation: forward

Symbol	Name	Function Class
Gm39683	predicted gene, 39683	within coordinates
Gm69913	predicted gene, 69913	within coordinates
Rr421238	regulatory region 421238	663 bp distal
Rr421239	regulatory region 421239	440 bp distal
Rr421240	regulatory region 421240	within coordinates
Rr421241	regulatory region 421241	295 bp proximal