rs31601268 SNP Detail

Summary

• ID
  rs31601268
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135816064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT CATCCCAGTT GTCAGGATCC
  R
  TTGGCGTCAG TGAGCAGGAG GCAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss45551064	mCV25139953	ABI	CRAMUS_MOUSE	f	SNP	A				G		A
ss51643559	NES14647536	PERLEGEN	MM_PANEL2	f	SNP		G	G	G		G	A		A		G
ss135930450	ENSMUSSNP631837	ENSEMBL	ENSEMBL_Sanger	f	SNP	A						A
ss320972535	CHEV_3_135773267	CHEVERUD	SCREENING_POP	f	SNP								G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs31601268					SNP	A	G	G	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51643559	NES14647536	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135816064 () rs orientation: forward

Symbol	Name	Function Class
Bank1	B cell scaffold protein with ankyrin repeats 1	Intron
Rr585805	regulatory region 585805	602 bp distal