rs31600223 SNP Detail

Summary

• ID
  rs31600223
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124067410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCATTTA CCTTTCTCCT
  CATATTCTTT TCTGTTTATA TATAAATTCT AAAAACTGAT GTGCTGTAGT GAATATTGGG
  AAAATCAAAA CAAGACTGTA CAGAGAATAA GGTGGAATAT CTGTGATTTT TTTATTATTA
  CTATTATTTA GTTTATTATA TAATTAGCCA CTACTCTTTC CTTTCATCCC TCTAAACTTT
  Y
  CATATAACCT TCCTTGCTCC CTCTCAATTG CATGGTGTCT TTTAAAGTTA ACATATATAT
  ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATCCATTC ATGTGTGTGT
  GATATGCATA CTACAGTGTG GATGTGCACA GCAGAGTATG GATTCAGGGT GTCACTTTTC
  ACTTTCCACC CTGTTAGAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45551171	mCV24048927	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss135783759	ENSMUSSNP4291201	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320926845	CHEV_3_123976679	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31600223					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124067410 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	401 bp distal
Rr584585	regulatory region 584585	1134 bp proximal