rs31599904 SNP Detail

Summary

• ID
  rs31599904
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:69901017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTAAAAATA TGCACTCTCT GCCCAGAGTT CAAAGTGCAT CAAGATGATC CCTGTCCCAT
  TTTGTTCTCA GGAACAACCT CTCTTACAGC TGTGTTTTTG TTCTCTCAAG GGAATTATAG
  AAGAATCCAA GATAGCAGGT AGTGTCAGTT GTCTTTAGAA GATTCTAGAT CAACTTCTTC
  CTCTGAAGAC TAAAGTTATA TCCTGTGATG TTAAAACTGT TGGTTTCTGA TTTCTATTCT
  CCCTGACCTG CCACGCCCTG TGCTTGCTGC AATCTCATTG TAAGTCACGT TTCCTTCACA
  R
  AGGAAAATGC AAAATGCTAT TTACCTTACC TCTAAACTGC AGCTTCGTTC TACAGTGTGT
  AATCTTTACT AGATTTTATT TGGTTTTCCT TTTTCGGTAT AGCTGCTCGT TTATTCTGAG
  TTTTAAAGTT TTGCTGAGAT TATGCACTTT ATACAAAAAA AGCTCGTATA GAGAATCAAG
  AACCGTAAAG GGTCTGAGAT CTTAACCTAC TTGCAAAGCA AGACATTAGC CTCCCACAGT
  CTAATGGGTT CTGGTAGAAG AAATGAGACT CCTGGGTCAA AGACAAAGCA CAATTTATTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45550845	mCV24534194	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31599904					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:69901017 () rs orientation: forward

Symbol	Name	Function Class
Rr578250	regulatory region 578250	194 bp proximal