rs31598795 SNP Detail

Summary

• ID
  rs31598795
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:141873720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGCAGGAAT AAAGAAAGCT GAGAATGGCA GTAATTAACT
  TCAAGCTAAC TTTTCCATAA AAAGCCATTG CCGATATGAT TTGCTTGCAG CGCGCACGTA
  W
  TTTTTTTTTT TTTTGCCACA CAATGATCCA AGTGTGTCAC AGCTAACATA TTTCACTAAC
  ATGTAATATC CTCGACAACA TCCTCGTAAT GAGAATGCT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45550645	mCV24098357	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	T
ss136010859	ENSMUSSNP4431744	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31598795					SNP	A	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141873720 () rs orientation: forward

Symbol	Name	Function Class
Bmpr1b	bone morphogenetic protein receptor, type 1B	Intron
Cpgi13885	CpG island 13885	812 bp proximal
Rr586389	regulatory region 586389	403 bp proximal
Rr586390	regulatory region 586390	1244 bp proximal
Rr586391	regulatory region 586391	1340 bp proximal
Rr586392	regulatory region 586392	1499 bp proximal
Tssr35928	transcription start site region 35928	1237 bp downstream
Tssr35929	transcription start site region 35929	1352 bp downstream