rs31595826 SNP Detail

Summary

• ID
  rs31595826
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126070985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGCATGCAT GTTTGTGTAC CATGTGTGTC CTTGGTGCTG
  TCAAGACCAA AAGATGCTAT CAGATTTTTC TGATAATTGT GAGCTGCAGC TGGGAGCAGA
  W
  TCCTGATCCT CTGGTAGAGC TGTAAGTACT CTCACCTGCT TACTCATTCC TCTTTACCCT
  CAACATTTGC TTTATAAAGA ATTTTTAAAG ATTTATACT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45551404	mCV23909525	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	A
ss135827575	ENSMUSSNP3004982	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss320943745	CHEV_3_125980254	CHEVERUD	SCREENING_POP	f	SNP						T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31595826					SNP	A	A	A	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126070985 () rs orientation: forward

Symbol	Name	Function Class
Gm18916	predicted gene, 18916	694 bp upstream
Rr584628	regulatory region 584628	694 bp distal
Rr584629	regulatory region 584629	1519 bp proximal