rs31595609 SNP Detail

Summary

• ID
  rs31595609
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105021716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGACAGAG TTTAAACAGA
  TAAAAATTCC TCAGACACTT CAAAGAGCTA CACTAGTGTT ACTGGTTATT ATTATAGCTT
  TTATTCTACA AAACCTTCTG AGAGCACAGC TGGGGACTTC TTTCCAGGCT TTATATAGTT
  CTCCAACCTT TTCTAGGATG GAAAGGACCA AGGGAGAGCT CTGGACCATA TGCAGTGGTC
  K
  GACTAAGCAC TCCTTTGTAG AGCCAGGCTC ACTTCCAGGA AGAGTTCTGA TTGGCTGGTC
  CCTCATGCAC AAAGCAGCAG GCCTATATCA GAACAGACAC TAGATGGCAG CATGCGGCAC
  AGTGGGGGTA CATCTGATGG GCCTGAGGCT ATCTGTATCC TCTGCTCACA GGGTGAGCAT
  TTTAGGGCTA AAGAAAAGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45550313	mCV23173426	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
ss135573387	ENSMUSSNP5416348	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31595609					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105021716 () rs orientation: forward

Symbol	Name	Function Class
Gm40118	predicted gene, 40118	within coordinates
Rr582673	regulatory region 582673	within coordinates
Rr582674	regulatory region 582674	93 bp proximal