rs31595117 SNP Detail

Summary

• ID
  rs31595117
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19400788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCGGGCA CCTTAGTTAT
  TTCCATCTGT CATGTTGATT TCTTATCACA CAAAATAAAA AATAAAAGTG ATTAACATTT
  TATATTGGAG AATACCAAAT AATGAGACAG TGTTTGAGGA CAGCTAAATG AGAGCCTTTG
  GATTTTCCAG CTTTGTAATT GTGTTATTCA CCAAAGCGAA AGTGATATAA CATTGATAGC
  R
  TGATGGTTGA TCTTCATTTC ATCTTACCTG GGTTTTAGAA TCACCTAGGG GACACCTCTG
  GGAGTGTCTG TGAAAGCATT TTCAGAGATG TTTGACTGAG GAGGAAGGAC ACTCCATGAG
  AGTGTGGACA GCACCACCCA GGGTCCTAGA CTAAATAAAA GGGAGAGAAC AAGCAGACAG
  CTCCCTGTGA ATGCAGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45549650	mCV25299498	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss134667110	ENSMUSSNP518077	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31595117					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19400788 () rs orientation: forward

Symbol	Name	Function Class
Rr573976	regulatory region 573976	1621 bp proximal