rs31594437 SNP Detail

Summary

• ID
  rs31594437
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:57379887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGACTTAG GGATATATGG
  TGAACGTAGG ACAACAGGAC CAGTCAAATG CCTTAGTCAA CCCTGAAACC TAACTCTACA
  GTGTGCTTTC CTAATAACTA TACCTCATGT TCCAAGGGCT ATGTAGCAGC CACTGATTGC
  CCTATACGCT TTGCTAGGTA TGTTTTTAAG TTCTGAAAAA TCTCTTAAAA ACTCAAGACA
  S
  AAAACAGCCC TTTAAATCTT CCCTGAGAGG AGCACGGCTC TCCTTGGCAG CATGGATCTG
  AAATGGCTGT GTGAGGCTGG GCAGCTGACC CTACCCCCAC CCCCAGAGTG GCTGTCAAGC
  TTGACAGAAA TCTGTAAAAC CTGCTGAAAG AATCCTGTGC CTGCCTCCCT CCATCTGTGT
  CCCTGTTGCC CTGGAAACGA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45550390	mCV22290795	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss135201525	ENSMUSSNP632137	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs31594437					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57379887 () rs orientation: forward

Symbol	Name	Function Class
Rr1931	regulatory region 1931	769 bp distal
Rr375020	regulatory region 375020	596 bp downstream
Rr577104	regulatory region 577104	630 bp distal
Rr577107	regulatory region 577107	within coordinates
Wwtr1	WW domain containing transcription regulator 1	Intron