rs31593408 SNP Detail

Summary

• ID
  rs31593408
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143855167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGTTAGA GCCACCGTCC
  CCACATCCCA TGGGACACTA GTTACATTTC TCATTGCCGT GGTCATTACT AACAAGAAGC
  AAAGTGAGAA AAGGAAGATC TTTTGGAGCC TGTGGTTTGA GGGTACAATT CATCATGATG
  GGGACGGCAC GGTGGTCGAG GTGGCTCACA GGCAGGGCAT GAGGAATGTG TTGCTTGCTC
  S
  TATTTGGATA GATCAGGAGT CAAAGGAAGA GGGATTTCAG CACTCTACTG GCTTTCTCCC
  TCCCCGTCTT TTATTTAGTC TGGGAGCCCA GTCCAGGAGA CAGTACCACC ACAGTCAGGG
  TAGATCGTCC CTTCTCAGCC GCTCCTCTCT GAGAAAGCCC TCAGAGACAC ATCCAAGGCT
  GAGTGACATT AGTTCCTGGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45549236	mCV23567585	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss136029025	ENSMUSSNP3281505	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31593408					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143855167 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	1971 bp distal