rs31592234 SNP Detail

Summary

• ID
  rs31592234
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121570943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGTAAGATG CAAGCCTGCC AACCTGAGGT CACTTGTCTA
  AGCCTACAGT AGACTGGGAG GAAAAACTAA CTCCACGAAT CTGTCCTCTG ACCACCAAAA
  S
  CACTCAGTAG CAGGCCCTCC TCAATAATAA AAAAACCAAG AGAATGATAA ATGAACATCT
  TGTTACTAAG AGAGTATCTG GCACAGGCCA AGCCAGGGA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45548966	mCV24754166	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss135729093	ENSMUSSNP5502875	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
ss320905788	CHEV_3_121480212	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31592234					SNP	C	C	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121570943 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	614 bp proximal
Rr584167	regulatory region 584167	912 bp proximal
Rr584168	regulatory region 584168	1258 bp proximal