rs31590393 SNP Detail

Summary

• ID
  rs31590393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104846363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAT AAAGTGCCCA GGAGAGGAGG
  R
  GAAAAGCTGA GATGAAGCTG AGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45549895	mCV27551476	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss135572333	ENSMUSSNP4719780	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31590393					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104846363 () rs orientation: forward

Symbol	Name	Function Class
Gm65748	predicted gene, 65748	1769 bp upstream
Rr375523	regulatory region 375523	1699 bp downstream
Rr582630	regulatory region 582630	833 bp distal
Rr582631	regulatory region 582631	228 bp distal
Rr582632	regulatory region 582632	1638 bp proximal
Rr582633	regulatory region 582633	1780 bp proximal