rs31576005 SNP Detail

Summary

• ID
  rs31576005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121571294 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAGAAAGA TTAGGCTGAG ACAGACATTA TAGAGCATGA
  GTTAAATTAC AGACCTAAAC CAGATAAAGA GGGAGAAAAT AACAGAAAAA TACAAGAAAT
  R
  ATGCTTTGCC CCACAGCTTG TGACAGTGCT GCCATGCCAC CAGGTCTAAA CGCACCAAAG
  CTGTTCTTAT CCCAGCACCA CAGTAGTCCT CACAACGAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45547656	mCV24754154	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss135729102	ENSMUSSNP4266648	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			A
ss320905791	CHEV_3_121480563	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31576005					SNP	G	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121571294 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	263 bp proximal
Rr584167	regulatory region 584167	561 bp proximal
Rr584168	regulatory region 584168	907 bp proximal