rs31570721 SNP Detail

Summary

• ID
  rs31570721
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101263306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGAGCTG TTTTGGTGTA
  ACCTCTTGCA GAAGGTCCCA ACAGACCAGG CTAAAAATAA AAACCAGTCG TTTAAAATGA
  AGTTCCGCGT CACCAAAGTG AGACTAAGCT GTTTATCTGA CCTTGTCAGG AATCAGGGCG
  ACAGAGATGA TAGCTTGCAA ACAGCCAGGT TCAGGCAGCA GAATAATGAA GGCTACTGTG
  M
  CCTAATCCGA AAAACCCCCT TACCTCCAAA GTACCTGAAG TTAAGGAGTC CCTTATTTTT
  CTGTTGCTTT GTCTCTCATC CCTGCCTTAC ATGGCCAGGG CTTTGGAACA GCCCATCTGC
  CTTCTGTGCT TTGTTTCTGC TTTCTCCTGC CTTTTCTTTC TAGGAAACCG AGCTCATCCG
  CCCAGTCCCT TGGAACACAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45547254	mCV23815901	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss135546736	ENSMUSSNP4186008	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss320851924	CHEV_3_101159913	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31570721					SNP	C	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101263306 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	1387 bp upstream
Rr582017	regulatory region 582017	1535 bp distal
Rr582018	regulatory region 582018	897 bp distal
Rr582019	regulatory region 582019	within coordinates
Rr582020	regulatory region 582020	694 bp proximal