rs31568733 SNP Detail

Summary

• ID
  rs31568733
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83359475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTA TGACTGACAT CATTTTCCCC
  Y
  AGAGTTAATT TGCCTTGTGT CTGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45546776	mCV23503621	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss135415349	ENSMUSSNP2614045	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C		C
ss320821483	CHEV_3_83256090	CHEVERUD	SCREENING_POP	f	SNP					C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs31568733					SNP	T	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83359475 () rs orientation: forward

Symbol	Name	Function Class
Rr578862	regulatory region 578862	1150 bp distal
Rr578863	regulatory region 578863	1306 bp proximal