rs31563755 SNP Detail

Summary

• ID
  rs31563755
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:118358283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACATCAA GGCATGCAGC
  CTTTTTGTAT GTTCTTATAA TGTATTCAAT CAACAGATTA AAGTGTTAGC AAGAACAGCT
  TCTAAAAAAT TCTTCAGCCC GTCCTAGTAA GGCAATCACC CCAGATCCTC ATAGACAAGG
  AGTTAGAGAT GATTCGGGCG AGGGAGACTG AAACTGTTAG AAATTAAGTT CAGGGTTGTA
  W
  AAATGACTGG CCACTATTCC AACATAGGTG TCTGGACAAG GCAAAGTTTA CTCTTGGCCA
  GGAGGGTGTG CCCCAGAGAG CCAACCCAGA AACAGGAAGT ACACTTAGTT TTATTCAAAG
  GAAGGTGCTG TGGTGATCTG AGTAAAAATG GTGTCCACGG GTCCATAGGG AGTGTAGATA
  TTGGGAGGTG TGACCTGGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48064716	NES11726758	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31563755					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48064716	NES11726758	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118358283 () rs orientation: forward

Symbol	Name	Function Class
Rr637473	regulatory region 637473	1170 bp distal
Rr637474	regulatory region 637474	1627 bp distal