rs31558326 SNP Detail

Summary

• ID
  rs31558326
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151773067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTGCAGG CAGACTGTAG
  TAGAGGCAGA GACCTGCCCC GAAACTCAAC AAGTTATTTC TTGTGCCCTA AGAGGTCTGG
  ATGAGGGCAC AGATGCCACA GGGGCAGCAC CTCCCCACAG AAATGAGGAG GGTGTCAGAG
  AAATGGGGGC TCACCCTCCC GGTGTCAGCA AGGCCGAGCG AATCTCCCTT CACGTACACT
  W
  CTGTAGCTGG CCCGGTGTTC CCTTAAACAA GTTTCTAGAA GTGGGACAGA GTCGGAGCAA
  AGGGCAGCTC TGAGCCTTTT CATCCACGTT ATCAATCAGC AGACAGCGCA CAGATCTCCG
  TTCCCTACAG CAGTGGAGGA GGGCAGCCAT TCCTTCACAC TGGGCTGGGC TGACCGGGTT
  AGATGATGCC TCCTTATTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45546659	mCV24211740	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss136100493	ENSMUSSNP2915172	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		A		T
ss321027909	CHEV_3_151730394	CHEVERUD	SCREENING_POP	f	SNP				T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs31558326					SNP	T	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151773067 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	282 bp upstream
Rr587440	regulatory region 587440	490 bp distal
Rr587441	regulatory region 587441	564 bp distal