rs31555722 SNP Detail

Summary

• ID
  rs31555722
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87471783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT TTATTCATTG AGATAGTCTC
  M
  CTATGTAGCC CAGGCTGGCC AGGAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45546432	mCV24897515	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss135464173	ENSMUSSNP3550028	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss320834281	CHEV_3_87368398	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31555722					SNP	C	C	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87471783 () rs orientation: forward

Symbol	Name	Function Class
Rr579522	regulatory region 579522	1662 bp distal
Rr579523	regulatory region 579523	1896 bp distal
Rr579524	regulatory region 579524	888 bp proximal