rs31548641 SNP Detail

Summary

• ID
  rs31548641
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121285933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAACGGGGC TGCTCCTCCA GGTACTGAAG TCTGGGTTCA
  GGTATCAGAT TTCTGAGCGG GTTTCACGGC AGTGGGATAA ATCATTTGGG ACAGGGGAAC
  K
  GGGGTCCCTG ACTTCCCTCC CAAGTCACAA GGCTAAGCTC TGCAGGGCTT GTCTGCAGGA
  GGACACAGAG GTTTAGAAGC TGGGTTATCA CATGATGAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45545063	mCV23991158	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss135722311	ENSMUSSNP6782856	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31548641					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121285933 () rs orientation: forward

Symbol	Name	Function Class
Rr584094	regulatory region 584094	1675 bp proximal
Slc44a3	solute carrier family 44, member 3	Intron