rs31547892 SNP Detail

Summary

• ID
  rs31547892
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:79959665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCATGCTGT CCAATTCTCC
  AGCGTCATTC AGCCAGCACC AACCTTGGCA TCCTGGCAGT GTTTCAGAAT GCTTGCTTCC
  TCAGAAGTTC AACGCTGTAC ACTGAACACT GTGTTTGCTT CCCAGTTATA GAAAACACTT
  GCAGCTTTGC TAATGTTTCC TGTGGGTTTT TTTTTTTGTG TGTGTGACTA TTTTCTTATG
  R
  TTATTCTAAT ACTATGTATT ATTCTATTTA AGATTTTTCC AGATGTCGAT GAATAACAAA
  ATAACATTTT GTTATTTCTG TATAGACTTA AGAACCAATT TGTAAATTTC CTGAGAAATT
  CTGGTAACTC TATGATGAGT AAATTAAATT TCAGCAGCAT GGTTTTTTGT TTGTTTTGTT
  TTGCTTTTTG GTTTGTTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45544863	mCV23377005	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss135378802	ENSMUSSNP5365952	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31547892					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:79959665 () rs orientation: forward

Symbol	Name	Function Class
Gm65495	predicted gene, 65495	within coordinates
Rr578634	regulatory region 578634	23 bp distal
Rr578635	regulatory region 578635	558 bp proximal