rs31547154 SNP Detail

Summary

• ID
  rs31547154
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125100370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGTTGCT ACCTTAAATT
  CTTGATCAGT GATTGAGTTT AAGGTAAAAT AAACCCTTAA TTTCCAAATT ATAATATATA
  GTATATATTA TATATAATAT TAAATATATA TTATCATAGC TGTAGAAATC CTAAGACAAA
  TGGATTTATA CAATAATTTT GGCCAGATTC ATCAACATAA AGGCATTTGC CACCAAGTCT
  R
  TCAACACAAC TGTGGCAGTT TGAATAAGTA TGGCCCCCAT AAACTCATGT ATTTCAATTC
  TTGACCCATA GGGAGTGGCA GTACTAGGAG GTGTGGCTTT GTTGGAGTAG GTGTAGTCTT
  GTTGGGAGAA GTCTGTCACT ATGGGAGCAG CCTTGATGCC TCACGTGTTC AAGCTATCTC
  CAGTGTGACA GATTCTTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45544145	mCV24036424	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss135806134	ENSMUSSNP4641491	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss320935450	CHEV_3_125009639	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31547154					SNP	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125100370 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	20 bp proximal