rs31527803 SNP Detail

Summary

• ID
  rs31527803
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127795209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTGACTG GGCAACACAT
  TAATGTACAC GTACAGCAAA ATGTCACCAG GAGTCATTTC ATTGCTATAT TTTGTTGTAG
  TTGTGGTTCC ACAGAGCAGT AGTATTTGGT TTTGCCTCAG GTCCCTGGAT CATCTAGTCT
  TAGGTTCTTG GTTACCTAAA CAGTGCTAGG TATGGCGGCA TAGGCTCCAT CCCATGGAGT
  R
  GGCCTTCAGT CAAATCAGAT ATTGTTTGGT TATATTCCCA CATGCTGTGT GCTGCCATTT
  CTCTAGCATT CTTATGAGGA CACAACTGTA GATCTGTAGG TTTTGTAGCT AGTTTAGTGT
  TTATCTTTTT CCTTTGGTGG TATGCAGAGT ACCTTCACTG TAATTTATCT GAGACAATGC
  AAAGTTTTTA TTAATTTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45542359	mCV25234262	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss135877553	ENSMUSSNP254533	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320959101	CHEV_3_127704478	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31527803					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127795209 () rs orientation: forward

Symbol	Name	Function Class
Rr52	regulatory region 52	within coordinates
Rr584916	regulatory region 584916	414 bp proximal
Rr584917	regulatory region 584917	501 bp proximal