rs31526695 SNP Detail

Summary

• ID
  rs31526695
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:30751971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT TTGCCATCGC AGCACAGTGT
  R
  CATTTCTACT TGGTTTAGTC TACTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45543030	mCV25262069	ABI	CRAMUS_MOUSE	f	SNP		A	G					A		G
ss51448736	NES14440208	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	G		G	G	A	A	G	A	A	G	G
ss134732426	ENSMUSSNP5188247	ENSEMBL	ENSEMBL_Sanger	f	SNP			G							G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31526695					SNP	A	A	G	G	A	A	G	A	G	G	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51448736	NES14440208	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30751971 () rs orientation: forward

Symbol	Name	Function Class
Lrrc31	leucine rich repeat containing 31	Intron
Rr574814	regulatory region 574814	1097 bp distal
Rr574815	regulatory region 574815	1296 bp distal
Rr574816	regulatory region 574816	1998 bp proximal
Tssr32902	transcription start site region 32902	1943 bp downstream