rs31524514 SNP Detail

Summary

• ID
  rs31524514
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:27174442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGACAAA AAGTCACTGG
  ACTCATGAAG GTTAAGAGAC TGAGGCCAGG GCTTGAAAAG GTACAGAGAT GGCCACAATA
  AGAATTAAAG CACAAGGGAT CTTGGGAGCC AATTATGGTA AAATATGAAG GGGATATAAA
  ATTAAAAAAC AAATCACAGC TGTACTAAAA GCAAAGATAA ATTCCATAAG CAATTGTTAA
  R
  GAAACCTAAA TAACCCAACC TAACAAAATG AGGCCAGCAG ACCTAGAGAT TTCAACAGGA
  AAAAACCTCA AAAACTATTA ACAGAAACAA AGAAAACCAG TCAGGCCCCT GCTAATGAAC
  GCACCTTCAG GTAAAATGGG ATTAAGATTG ACACCTGACC TTGTTTTCAA AAGCAGAGCA
  GGCTGAGTGG TTATTGCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45542311	mCV24689259	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss134702197	ENSMUSSNP1156168	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs31524514					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:27174442 () rs orientation: forward

Symbol	Name	Function Class
Ect2	ect2 oncogene	Intron
Rr574348	regulatory region 574348	1851 bp distal
Rr574349	regulatory region 574349	1932 bp proximal