rs31520719 SNP Detail

Summary

• ID
  rs31520719
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:121570894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGAACCTGT GCATATGAGT GGGCATCTTG GGCCAGTGTA
  ATGGCTCAGG GGTAAGATGC AAGCCTGCCA ACCTGAGGTC ACTTGTCTAA GCCTACAGTA
  S
  ACTGGGAGGA AAAACTAACT CCACGAATCT GTCCTCTGAC CACCAAAACC ACTCAGTAGC
  AGGCCCTCCT CAATAATAAA AAAACCAAGA GAATGATAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45542139	mCV24754168	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C
ss135729087	ENSMUSSNP7009607	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		C
ss320905786	CHEV_3_121480163	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31520719					SNP	G	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121570894 () rs orientation: forward

Symbol	Name	Function Class
Abcd3	ATP-binding cassette, sub-family D member 3	Intron
Rr584166	regulatory region 584166	663 bp proximal
Rr584167	regulatory region 584167	961 bp proximal
Rr584168	regulatory region 584168	1307 bp proximal