rs31515579 SNP Detail

Summary

• ID
  rs31515579
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:101010915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCAGCTAA GAGGATGCAG GGACCGTGCT CCACACTACA
  CCACTCCTCC CAAACTCTGC CTGCACCTCC TCATCTCTGG ACCATGCAGA GCCAGGGACT
  Y
  TTCCTGAGCT CCAACCTCAC TGTCCCTGTG CTGTGGAGTC CCTCTCCAGC CCGTTCCCCA
  GGCGGCTCTT CCACATGCTG GTGTCTCCCG GATCCTACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45541672	mCV23027591	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31515579					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101010915 () rs orientation: forward

Symbol	Name	Function Class
Ptgfrn	prostaglandin F2 receptor negative regulator	Intron
Rr581960	regulatory region 581960	1818 bp proximal