rs31512065 SNP Detail

Summary

• ID
  rs31512065
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:148692942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTC CTCCGTCTGA GTCTGAGAAA
  R
  CACGGTTTGT ATCTGGAGGA ACGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45541222	mCV22571222	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss136065988	ENSMUSSNP1578954	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321017035	CHEV_3_148650270	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31512065					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:148692942 () rs orientation: forward

Symbol	Name	Function Class
Adgrl2	adhesion G protein-coupled receptor L2	Intron
Cpgi13930	CpG island 13930	within coordinates
Gm43573	predicted gene 43573	within coordinates
Rr587240	regulatory region 587240	within coordinates
Rr587241	regulatory region 587241	1339 bp proximal
Tssr36077	transcription start site region 36077	1788 bp downstream
Tssr36078	transcription start site region 36078	1796 bp downstream