rs31493079 SNP Detail

Summary

• ID
  rs31493079
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126069155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTTGAA TATTTTAAAG
  TGTTTGCCAC ACATCTTCAT CCCTGGAGTC ATTCATTGAG GACATATCAG GAATTCATCA
  AACCATGACT GCTTTTGAAA GCATAATACG TGTGCTACTT CCTCCAAGAG ATTATTATTG
  CTCTACTCTT GTGTACATCT TTAATCCCAG TACTCAGAAA ACAAAGAAAG ACAAATCTCT
  K
  AGTTCAAGAT CAGTCTGGTG TACATAACAA GTTCCAGGCT ACCTAGGGCT AACTACATAG
  TAATACCATG TCTCAAAAGT AATACATAAG TAAGTAAATA AGTAAGTAAA ATGTGTCTGA
  CCTTAAATCC TAGCTCCACA AAAATTTAAC TGTGACTTTG AAGTCATTGC TTAATCTCGC
  TGTGCTTCAG GTTCTTTGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45540584	mCV23909560	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss135827539	ENSMUSSNP3677905	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31493079					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126069155 () rs orientation: forward

Symbol	Name	Function Class
Rr584628	regulatory region 584628	619 bp proximal