rs31485506 SNP Detail

Summary

• ID
  rs31485506
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125099509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACTTTAT TCGGGCTTAC
  TAGATTAAGA TGCTATTCAA GGCAATGGAA ACATCTGACT ATGCTGATGC ACAGCACATG
  TATTTCAGGA TGTGTTTCAG GAGAGTGTTC CAGAGAATGA AGAAGGCAAA TCCTATATGT
  TGAGTAGCAC TCAAGTTTGC CTTGCATTCT GAGGTCAGAA GTTTAATTAT TATATTAATA
  K
  TCAATGCTCC CCATTGGTAC AGATAAAAAA CATTATACAT ATTTTAAAGG TTTGTTTCTA
  TGAGAAAAAA AAGCCTCCAT AAAAATTTTC TAGCTGGGCA GTGGTGGTGC ACGCCTTTAA
  TCCCAGCACT TGGGAGGCAG AGGCAGGCAG TTTTTTGAGT TTGAGGCCAG TCTGGTCTAC
  AAAATAAGTT CCAGGACAGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45539637	mCV24036444	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss320935445	CHEV_3_125008778	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31485506					SNP	T	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125099509 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	881 bp proximal