rs31484906 SNP Detail

Summary

• ID
  rs31484906
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57354930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATTCTTTC CTTTCCTGCC
  CACTTACAGT CTCACCACTT GTGGCCCAAG TGGCTTCTCT CTTTCGGTTG ATCGGGTATG
  GCCGCTGCCT GCAGTCTTCT TCAGGGGACA TTCCACATTC CTGGATTGTC CCCACAGTAT
  CTTAGGCTAT ACTCCCATAG TTTGTTCAGC ACCTGCAGGG ACCTCAGTCC TACCACACAT
  R
  GCCTGGCCTC TCACCGTTTC CTTTGAAATC TGGGTAAACA CTTGGGTGAC CCCAGACCTC
  GTATAGTCTC CTTCCTCCCC TACAGAGTGG GGGCTCCTCT GCATGTGCTT CTTTTGAGCA
  TTGGGCCAGG CATGCAGTAA GTGATCATTA AAAAGAGATA TTAACCCTGT TATGTTAATG
  GAACTAAGTT ATCCTGCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45538649	mCV24427983	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss135201371	ENSMUSSNP2354479	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31484906					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57354930 () rs orientation: forward

Symbol	Name	Function Class
Rr577097	regulatory region 577097	1304 bp distal
Rr577098	regulatory region 577098	367 bp proximal
Rr577099	regulatory region 577099	567 bp proximal
Rr577100	regulatory region 577100	1009 bp proximal
Rr577101	regulatory region 577101	1169 bp proximal