rs31481420 SNP Detail

Summary

• ID
  rs31481420
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34048814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAATGTTTT GTTTTTAAAT GGTTCAGACG GGAGATGGCT
  TGGTAGGTGC AAGGTTGGCA ACCTTAATTT TATCCGTGTA ATCTCACATA AAGGTGGATG
  R
  GGGAGTCAAC CCCACCCCAC CCCCAGTAAT AATAAGTAAA TAAGCACATT GTTGTGTTTA
  AAGACTGAGC TATGCTCTCA GCAAAGGGTT GTTATTAGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45538715	mCV22841833	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss320700910	CHEV_3_33893587	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31481420					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34048814 () rs orientation: forward

Symbol	Name	Function Class
Gm43077	predicted gene 43077	within coordinates
Gm64430	predicted gene, 64430	within coordinates
Rr575091	regulatory region 575091	909 bp distal
Rr575092	regulatory region 575092	521 bp distal