rs31481146 SNP Detail

Summary

• ID
  rs31481146
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:169775409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTCCAGT GAGTGTCATC
  AACATGGTGC ACATGAAACC CGACTCCTCG ACCATTCAAC CTACTCACAA GCATCAGTTT
  CGCAAGTATG AATCCATGGG CCTCTGACCC CAAGCCCTTG ACCACAGCTC AGCCATCCCT
  CGGTGGTACC TCAGGACAGT AAGTAGTCTG GGTGTAGCCC TGTAAGCACC GGAAGACTAC
  S
  TGGCCCAGAA GCCACAGAGT AAGGGTGACC TCTGCTGGCT GTGAGTGACC ACAGGAACCT
  GCTACCTGAA CTGTTCCATA AGCCCCACCA CCACTTAGCC ACGTACACAG GTCCAGTGTC
  TTATGTGGAT CTGTTTTCAG AGCTGTCAGT CTGACTGTCT GTCCATGTTT TTGGTAGGCT
  AGATTTTAAA TTATCTCCAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49743333	NES13034456	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31481146					SNP	C	C	C	C	G	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49743333	NES13034456	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:169775409 () rs orientation: forward

Symbol	Name	Function Class
Hsd17b7	hydroxysteroid (17-beta) dehydrogenase 7	1700 bp downstream
Rr422992	regulatory region 422992	22 bp proximal