rs31477627 SNP Detail

Summary

• ID
  rs31477627
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:50891764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG AATGGCAATC TCTGTGCCCA
  Y
  GGATCGAGCA CAGGCTAACC GTACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45537534	mCV24860992	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss135170020	ENSMUSSNP5749115	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss320761254	CHEV_3_50788265	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31477627					SNP	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:50891764 () rs orientation: forward

Symbol	Name	Function Class
Gm64782	predicted gene, 64782	1231 bp downstream
Rr576183	regulatory region 576183	717 bp distal
Rr576184	regulatory region 576184	within coordinates