rs31476761 SNP Detail

Summary

• ID
  rs31476761
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37780069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCT GTGCTCACCA GCCTCATCCC
  R
  CCACGGCCAC GGCCACCCCT GTAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45537429	mCV24773884	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss134812062	ENSMUSSNP4776726	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320712078	CHEV_3_37624842	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31476761					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37780069 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13102	CpG island 13102	1253 bp distal
Gm5148	predicted gene 5148	1560 bp upstream
Gm36620	predicted gene, 36620	within coordinates
Rr575548	regulatory region 575548	1895 bp distal
Rr575549	regulatory region 575549	1602 bp distal
Rr575550	regulatory region 575550	940 bp distal
Rr575551	regulatory region 575551	704 bp proximal
Tssr33056	transcription start site region 33056	1582 bp upstream