rs3147537 SNP Detail

Summary

• ID
  rs3147537
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89011392 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AAAGG ATGCCCTCCT CCTGGGTACT
  S
  AAAGAGCCTG GAGGAAAACT CCCCT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45915483	mCV23949607	ABI	CRAMUS_MOUSE	r	SNP	C	G	C
ss133368718	ENSMUSSNP1328309	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	G	C
ss321851081	CHEV_6_88984404	CHEVERUD	SCREENING_POP	r	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs3147537					SNP	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89011392 () rs orientation: reverse

Symbol	Name	Function Class
Gm66902	predicted gene, 66902	within coordinates
Rr1306	regulatory region 1306	266 bp proximal
Rr634069	regulatory region 634069	299 bp distal
Rr634070	regulatory region 634070	634 bp proximal