GCCTC CCCAGGTCTG TATGCAAGCA R AGAGCTTCAG CCCACAGGGG CCACT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
CZECHII/EiJ |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss8635693 | WI_WGS_6_89905774 | WI | MOUSE | r | SNP | T | C | |||||
ss45952084 | mCV23949608 | ABI | CRAMUS_MOUSE | r | SNP | C | T | T | C | |||
ss133368721 | ENSMUSSNP3939288 | ENSEMBL | ENSEMBL_Sanger | r | SNP | C | T | C | ||||
ss321851082 | CHEV_6_88984629 | CHEVERUD | SCREENING_POP | r | SNP | T | C | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
CZECHII/EiJ |
DBA/2J |
LG/J |
SM/J |
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rs3147536 | SNP | G | A | A | G | G | A | G |
Location: Chr6:89011617 () rs orientation: reverse | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm66902 | predicted gene, 66902 | within coordinates | ||||||
Rr1306 | regulatory region 1306 | 41 bp proximal | ||||||
Rr634069 | regulatory region 634069 | 524 bp distal | ||||||
Rr634070 | regulatory region 634070 | 409 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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